Pipeline release! nf-core/rnavar v1.1.0 - nf-core/rnavar 1.1.0 - Mighty Milano!

Please see the changelog: https://github.com/nf-core/rnavar/releases/tag/1.1.0

Pipeline release! nf-core/variantbenchmarking v1.2.0 - 1.2.0 Doubtful Adams!

Please see the changelog: https://github.com/nf-core/variantbenchmarking/releases/tag/1.2.0

Want to improve your genomic variant calling pipeline? Join our webinar to learn about ncbench, a powerful benchmarking tool. We'll also cover other essential genomic benchmarking topics. Register for free: https://t1p.de/o4al3 #bioinformatics #genomics #variantcalling #ncbench

Pipeline release! nf-core/pacvar v1.0.1 - v1.0.1 - Sardine [3/6/2025]!

Please see the changelog: https://github.com/nf-core/pacvar/releases/tag/1.0.1

Pipeline release! nf-core/variantbenchmarking v1.0.0 - Innocent Pamuk

Please see the changelog: https://github.com/nf-core/variantbenchmarking/releases/tag/1.0.0

Pipeline release! nf-core/sarek v3.5.1 - 3.5.1 - Akkatjåkkå!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.1

Pipeline release! nf-core/sarek v3.5.0 - 3.5.0 - Áhkájiegna!

Please see the changelog: https://github.com/nf-core/sarek/releases/tag/3.5.0

Want to improve your genomic variant calling pipeline? Join our webinar to learn about ncbench, a powerful benchmarking tool. We'll also cover other essential genomic benchmarking topics. Register for free: https://t1p.de/iz7ob #bioinformatics #genomics #variantcalling #ncbench

How do y'all handle primary and alternate #genome #assemblies for downstream analyses? What do you do about #annotation, #VariantCalling etc? What best practices are there?